store_reduced_archetype_bw: Save an archetype set
In CshlSiepelLab/nascentRNASim:
View source: R/archetype_archives.R
Description
Save subset of data required to make an archetype set.
Usage
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store_reduced_archetype_bw(
bed_path,
bigwig_plus,
bigwig_minus,
out_dir = ".",
flank_length = 20000
)
Arguments
bed_path
path to bed file that holds archetype regions
bigwig_plus
path to bigwig for plus strand
bigwig_minus
path to bigwig for minus strand
out_dir
directory to save files in
flank_length
length of region flanking those in bed file to save in the
subsetted bigwig files
CshlSiepelLab/nascentRNASim documentation built on Dec. 17, 2021, 3:08 p.m.
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View source: R/archetype_archives.R
Description
Save subset of data required to make an archetype set.
Usage
1 2 3 4 5 6 7 | store_reduced_archetype_bw(
bed_path,
bigwig_plus,
bigwig_minus,
out_dir = ".",
flank_length = 20000
)
|
Arguments
bed_path |
path to bed file that holds archetype regions |
bigwig_plus |
path to bigwig for plus strand |
bigwig_minus |
path to bigwig for minus strand |
out_dir |
directory to save files in |
flank_length |
length of region flanking those in bed file to save in the subsetted bigwig files |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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