Description Usage Arguments Value
View source: R/transcript_archetypes.R
Resample a vector of read coverage where each read only covers a single point.
Exports simulation annotations and data to bed and bigWig files respectively
1 2 3 4 5 6 7 8 9 | resample_reads(x, size, replace = T, jitter = 0)
export_simulation(
annotations,
data,
ta,
directory = ".",
simulation_id = "sim"
)
|
x |
a numeric or |
size |
number of reads to sample |
replace |
to sample with replacement (default: TRUE) |
jitter |
amount by which reads can be shifted to the left or right (default: 0) |
annotations |
a |
data |
a two element list containing a |
ta |
a transcript_archetypes-class object |
directory |
directory to write output to |
simulation_id |
character string to name simulation outputs with |
A resampled numeric vector of 5' read counts
A resampled numeric vector of 5' read counts
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