Files in DJFernandes/ABIgeneRMINC
Read, Write, and Analyzing Allen Gene Expression Raw Data
DESCRIPTION
NAMESPACE
R/AllStructureLabels.R
R/GOrilla_run.R
R/GridStructureLabels.R
R/allen_minc_vector_conversion.R
R/antsify.R
R/array_reshaping.R
R/disease_enrichment.R
R/geneFoldChange.R
R/interpolate.gene.r
R/list.all.allen.genes.R
R/midplane.reflect.R
R/ont.children.R
R/read.raw.gene.R
R/registration.R
R/rescale.abi.R
R/template_download.R
R/unionize.R
R/write.raw.gene.R
README.md
data/AllStructureLabels.RData
data/GridStructureLabels.RData
inst/extdata/ABI_genes.csv
inst/extdata/Dorr_resampled_200um.mnc
inst/extdata/GOrilla.pl
inst/extdata/GOtest/background.txt
inst/extdata/GOtest/target.txt
inst/extdata/Nrp1_P56_coronal_74272479_200um.zip
inst/extdata/P56_Mouse_gridAnnotation.zip
inst/extdata/Pdyn_P56_coronal_71717084_200um.zip
inst/extdata/disease_ontology.csv
inst/extdata/enrichment_stats.mnc
man/ABI_resample.Rd
man/ABI_template_align.Rd
man/ANTsify.Rd
man/AllStructureLabels.Rd
man/GOrilla_run.Rd
man/GridStructureLabels.Rd
man/adult_gene_expression_analysis.Rd
man/allenVectorTOmincVector.Rd
man/allen_gene_template_download.Rd
man/allen_s2p_template_download.Rd
man/check_registration_quality_png.Rd
man/deANTsify.Rd
man/disease_ontology.Rd
man/find.dev.gene.experiment.Rd
man/find.gene.experiment.Rd
man/geneFoldChange.Rd
man/gene_pad_arr.Rd
man/gene_resample_resolution.Rd
man/gene_to_NCBI.Rd
man/interpolate.gene.Rd
man/list.all.allen.genes.Rd
man/list.all.dev.allen.genes.Rd
man/midplane.reflect.Rd
man/mincAddANTsAttrs.Rd
man/mincVectorTOallenVector.Rd
man/minc_ants_register.Rd
man/mincvol_pad_crop.Rd
man/mouse_genes_to_human_genes.Rd
man/ont.children.Rd
man/read.raw.atlas.Rd
man/read.raw.gene.Rd
man/rescale.abi.Rd
man/silentmincwrite.Rd
man/unionize.Rd
man/write.raw.gene.Rd
src/interpgene.f90
