ANTsify: Convert RMINC and ABIgeneRMINC data to ANTsR images

In DJFernandes/ABIgeneRMINC: Read, Write, and Analyzing Allen Gene Expression Raw Data

Convert RMINC and ABIgeneRMINC data to ANTsR images

Description

Convert RMINC and ABIgeneRMINC data to ANTsR images

Usage

ANTsify(x)

Arguments

x	RMINC or ABIgeneRMINC data

Value

ANTsR images

Examples

# Here is an example converting ABIgeneRMINC data to ANTsR image
nrp1Filename=system.file('extdata/Nrp1_P56_coronal_74272479_200um.zip',package="ABIgeneRMINC")
ABIvec = read.raw.gene(nrp1Filename)
antsvec1 = ANTsify(ABIvec)

# Here is an example converting MINC data to ANTsR image
statFilename=system.file('extdata/enrichment_stats.mnc',package="ABIgeneRMINC")
mincvec = mincGetVolume(statFilename)
antsvec2 = ANTsify(mincvec)

DJFernandes/ABIgeneRMINC documentation built on March 21, 2022, 12:05 p.m.