gene_to_NCBI: gene to NCBI

In DJFernandes/ABIgeneRMINC: Read, Write, and Analyzing Allen Gene Expression Raw Data

gene to NCBI

Description

Converts gene acronym to NCBI gene IDs

Usage

gene_to_NCBI(
  genes,
  organism = "mouse",
  update_info = FALSE,
  parallel = NULL,
  conf_file = getOption("RMINC_BATCH_CONF")
)

Arguments

genes	gene acronyms
parallel	how many processors to run on (default=single processor). Specified as a two element vector, with the first element corresponding to the type of parallelization, and the second to the number of processors to use. For local running set the first element to "local" or "snowfall" for back-compatibility, anything else will be run with batchtools see pMincApply Leaving this argument NULL runs sequentially.
conf_file	A batchtools configuration file defaulting to getOption("RMINC_BATCH_CONF")

Value

NCBI gene IDs

DJFernandes/ABIgeneRMINC documentation built on March 21, 2022, 12:05 p.m.