ggplotBCV: ggplot version of 'edgeR::plotBCV()'.

ggplotBCVR Documentation

ggplot version of edgeR::plotBCV().

Description

ggplot version of edgeR::plotBCV().

Usage

ggplotBCV(
  y,
  xlab = "Average log CPM",
  ylab = "Biological coefficient of variation",
  rawdisp = NULL,
  ...
)

Arguments

y

A DGEList, or a data frame of the kind returned by getBCVTable(), which should contain columns named "logCPM", "CommonBCV", "TrendBCV", "eBayesBCV", and optionally "RawBCV".

xlab, ylab

Axis labels

rawdisp, ...

Additional arguments are passed to getBCVTable(). Note that this function is only called if y is a DGEList. Otherwise, these additional arguments are ignored.

Value

A ggplot object.


DarwinAwardWinner/rctutils documentation built on July 22, 2022, 5:19 a.m.