read_regions: Read a GRanges from a variety of possible file types.
In DarwinAwardWinner/rctutils: Utility functions by Ryan C. Thompson
View source: R/file_format_io.R
read_regions R Documentation
Read a GRanges from a variety of possible file types.
Description
This function attempts to read in a set of genomic regions as a
GRanges object. It does its best to auto-detect the input file
type. If it cannot do so, it throws an error.
Usage
read_regions(filename)
Arguments
filename
The file to read regions from.
Value
a GRanges object.
Possible input file types include: RDA or RDS file (containing a
GRanges or data frame), narrowPeak, BED, GFF, and SAF.
DarwinAwardWinner/rctutils documentation built on July 22, 2022, 5:19 a.m.
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View source: R/file_format_io.R
| read_regions | R Documentation |
Read a GRanges from a variety of possible file types.
Description
This function attempts to read in a set of genomic regions as a GRanges object. It does its best to auto-detect the input file type. If it cannot do so, it throws an error.
Usage
read_regions(filename)
Arguments
filename |
The file to read regions from. |
Value
a GRanges object.
Possible input file types include: RDA or RDS file (containing a GRanges or data frame), narrowPeak, BED, GFF, and SAF.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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