read_narrowPeak: Read a narrowPeak format BED file.
In DarwinAwardWinner/rctutils: Utility functions by Ryan C. Thompson
View source: R/file_format_io.R
read_narrowPeak R Documentation
Read a narrowPeak format BED file.
Description
NarrowPeak is a sub-format of the BED file format used as the
output format of some peak callers. rtracklayer::import.bed()
often throws an error when reading these files, so a separate
function is needed.
Usage
read_narrowPeak(file, ...)
Arguments
file
The file name to read from.
...
Additional arguments are passed to read.table().
Value
A GRanges object containing the ranges from file.
DarwinAwardWinner/rctutils documentation built on July 22, 2022, 5:19 a.m.
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View source: R/file_format_io.R
| read_narrowPeak | R Documentation |
Read a narrowPeak format BED file.
Description
NarrowPeak is a sub-format of the BED file format used as the
output format of some peak callers. rtracklayer::import.bed()
often throws an error when reading these files, so a separate
function is needed.
Usage
read_narrowPeak(file, ...)
Arguments
file |
The file name to read from. |
... |
Additional arguments are passed to |
Value
A GRanges object containing the ranges from file.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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