listCollections: List all collection types within a MSigDB gene set collection
In DavisLaboratory/msigdbR: An ExperimentHub Package for the Molecular Signatures Database (MSigDB)
listCollections R Documentation
List all collection types within a MSigDB gene set collection
Description
This function lists all the collection types present in a MSigDB gene set
collection. Descriptions of collections can be found at the MSigDB website.
Usage
listCollections(gsc)
Value
a character vector, containing character codes for all collections
present in the GeneSetCollection object.
Examples
gsc = getMsigdb('hs', 'SYM')
listCollections(gsc)
DavisLaboratory/msigdbR documentation built on July 27, 2023, 4 p.m.
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| listCollections | R Documentation |
List all collection types within a MSigDB gene set collection
Description
This function lists all the collection types present in a MSigDB gene set collection. Descriptions of collections can be found at the MSigDB website.
Usage
listCollections(gsc)
Value
a character vector, containing character codes for all collections present in the GeneSetCollection object.
Examples
gsc = getMsigdb('hs', 'SYM')
listCollections(gsc)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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