plotSampleInfo: Plot the user-defined meta data using alluvium plot
In DavisLaboratory/standR: Spatial transcriptome analyses of Nanostring's DSP data in R
View source: R/plotSampleInfo.R
plotSampleInfo R Documentation
Plot the user-defined meta data using alluvium plot
Description
Plot the user-defined meta data using alluvium plot
Usage
plotSampleInfo(spe_object, column2plot, textsize = 3)
Arguments
spe_object
A SpatialExperiment object.
column2plot
Which columns to plot.
textsize
text size.
Value
A ggplot object
Examples
library(ggalluvial)
data("dkd_spe_subset")
plotSampleInfo(dkd_spe_subset, column2plot = c("SlideName", "disease_status", "region"))
DavisLaboratory/standR documentation built on March 28, 2024, 4:23 a.m.
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View source: R/plotSampleInfo.R
| plotSampleInfo | R Documentation |
Plot the user-defined meta data using alluvium plot
Description
Plot the user-defined meta data using alluvium plot
Usage
plotSampleInfo(spe_object, column2plot, textsize = 3)
Arguments
spe_object |
A SpatialExperiment object. |
column2plot |
Which columns to plot. |
textsize |
text size. |
Value
A ggplot object
Examples
library(ggalluvial)
data("dkd_spe_subset")
plotSampleInfo(dkd_spe_subset, column2plot = c("SlideName", "disease_status", "region"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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