coverage_by_chrom: Calculate mean allele richness at all sampling levels
In DiDeoxy/PGDA: PGDA
Description
Usage
Arguments
Value
Description
Calculates the mean allele richness across all markers for a sample at all
sampling levels. Based on the formula presented in
https://www.genetics.org/content/157/1/389
Usage
1
coverage_by_chrom(snp_chrom, snp_pos)
Arguments
snp_chrom
a factor vector inidicating the chrom of each marker
snp_pos
a vector with the position of each snp on its chrom
Value
a table of expected allele richness for each marker at each
subsampling level with markers in rows and sampling levels in columns
DiDeoxy/PGDA documentation built on June 19, 2020, 5:38 a.m.
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Description Usage Arguments Value
Description
Calculates the mean allele richness across all markers for a sample at all sampling levels. Based on the formula presented in https://www.genetics.org/content/157/1/389
Usage
1 | coverage_by_chrom(snp_chrom, snp_pos)
|
Arguments
snp_chrom |
a factor vector inidicating the chrom of each marker |
snp_pos |
a vector with the position of each snp on its chrom |
Value
a table of expected allele richness for each marker at each subsampling level with markers in rows and sampling levels in columns
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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