EDIorg/ecocomDP
Tools to Create, Use, and Convert ecocomDP Data

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Search the EDIorg/ecocomDP package
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Functions
180
Source code
81
Man pages
33
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EDIorg/ecocomDP: Tools to Create, Use, and Convert ecocomDP Data
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API

API for EDIorg/ecocomDP
Tools to Create, Use, and Convert ecocomDP Data

Global functions
.onLoad Source code
EAL_make_eml Source code
EAL_read_eml Source code
EAL_template_arguments Source code
add_units Source code
annotate_element Source code
annotate_eml Source code
annotation_dictionary Man page Source code
ants_L0_flat Man page
ants_L1 Man page
api_get_provenance_metadata Source code
api_list_data_package_revisions Source code
api_read_data_entity_name Source code
api_read_data_package Source code
api_read_data_package_doi Source code
api_read_metadata Source code
append_rp Source code
assign_responsible_party_id Source code
calc_geo_extent_bounding_box_m2 Man page Source code
calc_length_of_survey_years Man page Source code
calc_number_of_years_sampled Man page Source code
calc_std_dev_interval_betw_years Man page Source code
check_script Source code
cnvmt Source code
coerce_all_merged Source code
coerce_table_classes Source code
convert_to_dwca Man page Source code
create_dataset_summary Man page Source code
create_eml Man page Source code
create_location Man page Source code
create_location_ancillary Man page Source code
create_observation Man page Source code
create_observation_ancillary Man page Source code
create_tables_dwca_event_core Source code
create_taxon Man page Source code
create_taxon_ancillary Man page Source code
create_variable_mapping Man page Source code
detect_data_type Source code
detect_delimiter Source code
detect_delimiter_method_2 Source code
detect_os Source code
dup_fxn Source code
flatten_ancillary Source code
flatten_data Man page Source code
flatten_location Source code
flatten_location_dwca Source code
flatten_tables Source code
format_for_comm_plots Source code
get_attr_defs Source code
get_eol Source code
get_id Source code
get_observation_table Source code
get_previous_version Source code
increment_package_version Source code
is_edi Source code
is_empty_nodeset Source code
is_neon Source code
is_prov Source code
issues Source code
join_obs_loc_tax Source code
make_eml_dwca Source code
make_neon_ancillary_location_table Source code
make_neon_ancillary_observation_table Source code
make_neon_location_table Source code
map_neon.ecocomdp.10003.001.001 Source code
map_neon.ecocomdp.10022.001.001 Source code
map_neon.ecocomdp.10022.001.002 Source code
map_neon.ecocomdp.10043.001.001 Source code
map_neon.ecocomdp.10058.001.001 Source code
map_neon.ecocomdp.10072.001.001 Source code
map_neon.ecocomdp.10092.001.001 Source code
map_neon.ecocomdp.10093.001.001 Source code
map_neon.ecocomdp.20107.001.001 Source code
map_neon.ecocomdp.20120.001.001 Source code
map_neon.ecocomdp.20166.001.001 Source code
map_neon.ecocomdp.20219.001.001 Source code
map_neon_data_to_ecocomDP Source code
not_all_NAs Source code
parse_datetime_frmt_from_vals Source code
parse_datetime_from_frmt Source code
parse_delim Source code
ping_edi Source code
plot_sample_space_time Man page Source code
plot_sites Man page Source code
plot_taxa_abund Man page Source code
plot_taxa_accum_sites Man page Source code
plot_taxa_accum_time Man page Source code
plot_taxa_diversity Man page Source code
plot_taxa_occur_freq Man page Source code
plot_taxa_rank Man page Source code
plot_taxa_sample_time Man page Source code
plot_taxa_shared_sites Man page Source code
read_criteria Source code
read_data Man page Source code
read_data_edi Source code
read_dir Source code
read_eml Source code
read_from_files Source code
read_table_dataset_summary Source code
read_template_attributes Source code Source code
remove_empty_templates Source code
save_data Man page Source code
search_data Man page Source code
to_docbook Source code
trim_data_for_test Source code
txcl_get_authority Source code
txcl_get_classification Source code
txcl_get_id Source code
txcl_get_id_common Source code
txcl_load_gnr_datasources Source code
txcl_make_taxonomicCoverage Source code
txcl_optimize_match Source code
txcl_optimize_match_common Source code
txcl_resolve_comm_taxa Source code
txcl_resolve_sci_taxa Source code
txcl_set_taxonomic_coverage Source code
update_neon_summary_info Source code
url_env Source code
validate_arguments Source code
validate_column_classes Source code
validate_column_names Source code
validate_column_presence Source code
validate_composite_keys Source code
validate_data Man page Source code
validate_dataset_structure Source code
validate_dataset_structure_old Source code
validate_datetime Source code
validate_elevation Source code
validate_file_names Source code
validate_id Source code
validate_latitude_longitude_format Source code
validate_latitude_longitude_range Source code
validate_mapped_id Source code
validate_path Source code
validate_primary_keys Source code
validate_referential_integrity Source code
validate_site Source code
validate_table_presence Source code
validate_taxonomic_coverage Source code
validate_taxonomic_coverage_authority_system Source code
validate_taxonomic_coverage_completeness Source code
validate_templates Source code
validate_variable_mapping Source code
view_taxa_authorities Source code
vocab_lter_term Source code
vocab_resolve_terms Source code
write_tables Man page Source code
xml_val Source code
EDIorg/ecocomDP documentation built on July 16, 2025, 8:05 p.m.

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