importBedlike: importBedlike

In ETHZ-INS/epiwraps: epiwraps: Wrappers for plotting and dealing with epigenomics data

importBedlike

Description

Imports a bed-like file as a GRanges object. Uses 'rtracklayer' import functions if possible, and falls back onto an import that's not format-committed otherwise.

Usage

importBedlike(x, ...)

Arguments

x	The path to a bed or bed-like file (can be gzipped)
...	passed to fread

Value

A 'GRanges' object

Examples

# example bed file:
filepath <- system.file("extdata/example_peaks.bed", 
                        package="epiwraps")
b <- importBedlike(filepath)

ETHZ-INS/epiwraps documentation built on Dec. 22, 2024, 4:05 a.m.