plotCovStats: plotCovStats

In ETHZ-INS/epiwraps: epiwraps: Wrappers for plotting and dealing with epigenomics data

plotCovStats

Description

Plots coverage statistics, such as as fingerprint plot.

Usage

plotCovStats(qc, labels = "AUTO", show.legend = TRUE)

Arguments

qc	A list of coverage statistics, as produced by getCovStats.
labels	Passed to plot_grid.

Value

A grid object to be plotted.

Examples

# we use an example bigwig file
bwf <- system.file("extdata/example_atac.bw", package="epiwraps")
# because most of the file is empty, we'll exclude some of the ranges
cs <- getCovStats(bwf, exclude=GRanges("1", IRanges(1, 4300000)))
plotCovStats(cs)

ETHZ-INS/epiwraps documentation built on May 4, 2024, 6:25 a.m.