mergeSignalMatrices: mergeSignalMatrices: aggregates two or more signal matrices.

In ETHZ-INS/epiwraps: epiwraps: Wrappers for plotting and dealing with epigenomics data

mergeSignalMatrices: aggregates two or more signal matrices.

Description

mergeSignalMatrices: aggregates two or more signal matrices.

Usage

mergeSignalMatrices(ml, aggregation = c("mean", "sum", "median"), assay = 1L)

Arguments

ml	A named list of signal matrices or an EnrichmentSE object as produced by signal2Matrix
aggregation	The method to aggregate matrices
assay	Assay to use (ignored unless 'ml' is an ESE object), defaults to the first assay.

Value

A single 'normalizedMatrix' object.

Examples

# we first get an EnrichmentSE object:
data(exampleESE)
# we merge the two tracks:
merged <- mergeSignalMatrices(exampleESE)
# we could then plot the merge (not run):
# plotEnrichedHeatmaps(merged)

ETHZ-INS/epiwraps documentation built on Dec. 22, 2024, 4:05 a.m.