format_ids: Reformat transcripts to facilitate fasta file conversion
In EliLillyCo/surfaltr: Rapid Comparison of Surface Protein Isoform Membrane Topologies Through surfaltr
format_ids R Documentation
Reformat transcripts to facilitate fasta file conversion
Description
Modify format of data to display all primary and alternative transcripts
from the same gene together and remove any duplicates.
Usage
format_ids(final_pairs)
Arguments
final_pairs
Data frame containing original row-wise pairings of
primary and alternative transcripts for inputted data without associated
sequences
Value
A data frame containing the gene names, transcript IDs, APPRIS
annotations, UniProt Swissprot IDs, UniProt Swissprot isoform IDs, and
UniProt TREMBL IDs for all the given and associated primary transcripts in
an alternating fashion
EliLillyCo/surfaltr documentation built on May 3, 2022, 10:12 a.m.
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| format_ids | R Documentation |
Reformat transcripts to facilitate fasta file conversion
Description
Modify format of data to display all primary and alternative transcripts from the same gene together and remove any duplicates.
Usage
format_ids(final_pairs)
Arguments
final_pairs |
Data frame containing original row-wise pairings of primary and alternative transcripts for inputted data without associated sequences |
Value
A data frame containing the gene names, transcript IDs, APPRIS annotations, UniProt Swissprot IDs, UniProt Swissprot isoform IDs, and UniProt TREMBL IDs for all the given and associated primary transcripts in an alternating fashion
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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