mc.mutRain: Compute distance between mutations for rainfall plots

In EmilieT/mutcraft: functions to decipher and plot mutation data

Description

Compute distance between mutations for rainfall plots

Usage

mc.mutRain(mutnet.obj, col.chrom = "chrom", col.pos = "pos",
  col.ref = "ref.allele", col.alt = "alt.allele", symetrize = c(TRUE,
  FALSE)[1])

Arguments

mutnet.obj	A dataframe of mutation info
col.chrom	Name of the column with the chromosomes
col.pos	Name of the column with the mutations positions
col.ref	Name of the column with the reference allele
col.alt	Name of the column with the alternative allele
symetrize	Boolean to symetrize reversable mutations or not

Value

A table with relative distance for each mutation

EmilieT/mutcraft documentation built on May 6, 2019, 3:47 p.m.