Man pages for EuracBiomedicalResearch/CompMetaboTools
Utility Functions from the Eurac Research Computational Metabolomics Team
| averageSE | Average replicated samples in a SummarizedExperiment |
| chromPeakArea | Get MS peak area (m/z and rt range) for chromatographic peaks |
| c-MChromatograms | Combine MChromatograms objects |
| dropModels | Remove model fits based on specified criteria |
| extract_time_stamp | Extract run start time stamp |
| groupByCorrelation | Group rows in a matrix based on their correlation |
| groupToSinglePolarityPairs | Sub-group allowing only single positive/polarity pairs per... |
| hidden_aliases | Internal page for hidden aliases |
| joyPlot | Create a stacked plot of multiple chromatograms |
| matchRtMz | Match features based on their retention time and m/z values |
| model-flagging | Functions to flag/exclude models |
| moreAreValidThan | Identify rows with a minimum required proportion of... |
| plot_pca | Plot of PCA results |
| sync_files_local | Create local copies of files |
| withinBatchAdjust | Apply per-batch model adjustment of feature abundances |
| withinBatchFit | Fit a model separately to each batch in an experiment |
