doc/impute.md
In FellouMada/rSNPdata: R package for Analysis of P. falciparum whole genome SNPs data
NAME
impute_missing_genotypes
USAGE
impute_missing_genotypes(snpdata, genotype="Phased", nsim=100)
DESCRIPTION
impute_missing_genotypes is a function that imputes the missing genotypes. Missing data can be phased from raw data (genotype="GT") or phased data (genotype="Phased")
OPTIONS
snpdata: an object of class SNPdata
genotype: the name of the genotype matrix to be used
nsim: the number of simulations
RETURN
a SNPdata object with an additional field
Imputed: the matrix of imputed data
FellouMada/rSNPdata documentation built on June 12, 2022, 7:29 p.m.
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NAME
impute_missing_genotypes
USAGE
impute_missing_genotypes(snpdata, genotype="Phased", nsim=100)
DESCRIPTION
impute_missing_genotypes is a function that imputes the missing genotypes. Missing data can be phased from raw data (genotype="GT") or phased data (genotype="Phased")
OPTIONS
snpdata: an object of class SNPdata
genotype: the name of the genotype matrix to be used
nsim: the number of simulations
RETURN
a SNPdata object with an additional field
Imputed: the matrix of imputed data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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