emalgth: Calculate the probability on condition that the sums equal to...

In FocusPaka/SIMD: Statistical Inferences with MeDIP-seq Data (SIMD) to infer the methylation level for each CpG site

Description

Calculate the probability on condition that only a single CpG contributes to a short read.

Usage

emalgth(X)

Arguments

X	A matrix about X, the elements in X takes values on 0,1 and satisfy the sums of each row equal to 1.

Value

y1 The probability when sums equal to 1.

Examples

set.seed(123)
d <- matrix(0, nrow=200, ncol=50)
random_num <- sample(1:50, 200, replace=TRUE)
for(i in 1:nrow(d)){
    d[i,random_num[i]]<-1
}
result <- emalgth(d)
head(result)

FocusPaka/SIMD documentation built on May 29, 2019, 10:57 a.m.