API for Galaxeee/TedSim
Temporal Dynamics Simulation of scRNA-seq and CRISR/Cas9 lineage barcodes
| Global functions | |
|---|---|
| BranchCal | Man page Source code |
| CIF2Truecounts | Man page Source code |
| CaptureDrop | Man page Source code |
| GeneEffects | Man page Source code |
| Generate_profile_multi | Man page Source code |
| Get_params | Man page Source code |
| Get_params2 | Man page Source code |
| Mutated_state_dist | Man page Source code |
| PlotTsne | Man page Source code |
| PlotUmap | Man page Source code |
| SIFGenerate | Man page Source code |
| SampleCIF | Man page Source code |
| SampleDen | Man page Source code |
| SampleEdgeNew | Man page Source code |
| Samplelineage | Man page Source code |
| SimulateCIFs | Man page Source code |
| SimulateCellStates | Man page Source code |
| True2ObservedCounts | Man page Source code |
| WalkTree | Man page Source code |
| amplify_1cell | Man page Source code |
| cal_amp_bias | Man page Source code |
| expand2binary | Man page Source code |
| generate_dropout | Man page Source code |
| generate_mutation | Man page Source code |
| get_prob | Source code |
| rnorm_trunc | Man page Source code |
