combine_pns_nodiv: Combine pn in the old wrong way
In Giappo/sls: Likelihood model for diversification processes with single lineage rate shifts
Description
Usage
Arguments
Value
Author(s)
View source: R/sls_convolutions.R
Description
Convolves all the processes before the shift and
imposes the death before the present of all species that
are not visible in the phylogeny.
It doesn't divide by N. Used to check on old models.
Usage
1
combine_pns_nodiv(lambda, mu, times, tbar, n_max = 100, fun = sls::pn_bar)
Arguments
lambda
speciation rate
mu
extinction rate
times
times
tbar
time left from shift time to the present
n_max
maximum number of lineages to consider
fun
a function
Value
Convolution of the probabilities for all the processes
Author(s)
Giovanni Laudanno
Giappo/sls documentation built on Feb. 1, 2021, 9:55 a.m.
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Description Usage Arguments Value Author(s)
View source: R/sls_convolutions.R
Description
Convolves all the processes before the shift and imposes the death before the present of all species that are not visible in the phylogeny. It doesn't divide by N. Used to check on old models.
Usage
1 | combine_pns_nodiv(lambda, mu, times, tbar, n_max = 100, fun = sls::pn_bar)
|
Arguments
lambda |
speciation rate |
mu |
extinction rate |
times |
times |
tbar |
time left from shift time to the present |
n_max |
maximum number of lineages to consider |
fun |
a function |
Value
Convolution of the probabilities for all the processes
Author(s)
Giovanni Laudanno
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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