loglik_preshift2: Calculates the preshift loglik using convolutions
In Giappo/sls: Likelihood model for diversification processes with single lineage rate shifts
Description
Usage
Arguments
Value
Author(s)
View source: R/sls_convolutions.R
Description
Calculates the preshift loglik using convolutions
Usage
1
loglik_preshift2(lambdas, mus, brts, n_0 = 2, n_max = 100)
Arguments
lambdas
speciation rates, for all the clades
mus
extinction rate, for all the clades
brts
branching times provided as a list of vectors, one for the
main clade, one for the subclade
n_0
starting number of lineages
n_max
maximum number of lineages to consider
Value
Loglik preshift for main clade
Author(s)
Giovanni Laudanno
Giappo/sls documentation built on Feb. 1, 2021, 9:55 a.m.
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Description Usage Arguments Value Author(s)
View source: R/sls_convolutions.R
Description
Calculates the preshift loglik using convolutions
Usage
1 | loglik_preshift2(lambdas, mus, brts, n_0 = 2, n_max = 100)
|
Arguments
lambdas |
speciation rates, for all the clades |
mus |
extinction rate, for all the clades |
brts |
branching times provided as a list of vectors, one for the main clade, one for the subclade |
n_0 |
starting number of lineages |
n_max |
maximum number of lineages to consider |
Value
Loglik preshift for main clade
Author(s)
Giovanni Laudanno
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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