Description Usage Arguments Value Author(s)
View source: R/sls_likelihoods_bisse.R
Provides BISSE loglik function (alternative version)
1 2 3 4 5 6 7 8 9 10 | loglik_bisse2(
pars,
brts,
n_0 = 2,
t_0 = 0,
e_0 = 0,
d_0 = 1,
log_scale = TRUE,
lambdaterms = TRUE
)
|
pars |
parameters of the likelihood functions:
|
brts |
branching times |
n_0 |
starting number of lineages |
t_0 |
starting time |
e_0 |
starting value for BiSSE's E function |
d_0 |
starting value for BiSSE's D function |
log_scale |
set it to TRUE if you desire the output in log form |
lambdaterms |
set it to TRUE if you desire the powers of lambda in the likelihood |
loglik
Giovanni Laudanno
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