Giappo/sls
Likelihood model for diversification processes with single lineage rate shifts

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Source code
30
Man pages
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Giappo/sls: Likelihood model for diversification processes with single lineage rate shifts
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API

API for Giappo/sls
Likelihood model for diversification processes with single lineage rate shifts

Global functions
cat2 Man page Source code
combine_ddd Man page Source code
combine_ddd_nodiv Man page Source code
combine_pns Man page Source code
combine_pns0 Man page Source code
combine_pns_nodiv Man page Source code
create_data_file_name Man page Source code
create_results_file_name Man page Source code
cut_loglik_from_name Man page Source code
d_t Man page Source code
default_params_doc Man page Source code
dft Man page Source code
e_t Man page Source code
get_function_names Man page Source code
get_model_names Man page Source code
get_param_names Man page Source code
get_pkg_name Man page Source code
idft Man page Source code
loglik_bisse Man page Source code
loglik_bisse2 Man page Source code
loglik_bisse_shift Man page Source code
loglik_bisse_shift2 Man page Source code
loglik_ddd Man page Source code
loglik_preshift Man page Source code
loglik_preshift2 Man page Source code
loglik_preshift_nodiv Man page Source code
loglik_preshift_unobs Man page Source code
loglik_sls_p Man page Source code
loglik_sls_p2 Man page Source code
loglik_sls_p2_nodiv Man page Source code
loglik_sls_p_dummy Man page Source code
loglik_sls_p_dummy_nodiv Man page Source code
loglik_sls_p_nodiv Man page Source code
loglik_sls_q Man page Source code
loglik_sls_q_nodiv Man page Source code
main_save_files Man page Source code
one_minus_pt Man page Source code
one_minus_ut Man page Source code
p_t Man page Source code
p_transition_matrix Man page Source code
pars_transform_back Man page Source code
pars_transform_forward Man page Source code
pc_1shift Man page Source code
phase_factor Man page Source code
pn Man page Source code
pn_bar Man page Source code
print_info Man page Source code
sim_adapt_l_matrix_size Man page Source code
sim_check_survival Man page Source code
sim_conditioning Man page Source code
sim_cut_l_matrix Man page Source code
sim_decide_event Man page Source code
sim_get_brts Man page Source code
sim_get_motherclade Man page Source code
sim_get_n_0 Man page Source code
sim_get_pars Man page Source code
sim_get_pool Man page Source code
sim_get_shifts_info Man page Source code
sim_get_standard_l_2 Man page Source code
sim_get_t_0 Man page Source code
sim_initialize_data_new_clade Man page Source code
sim_read_l_1 Man page Source code
sim_sample_deltas Man page Source code
sim_use_event Man page Source code
sls_check_input Man page Source code
sls_conds Man page Source code
sls_l_2_brts Man page Source code
sls_loglik_rhs Man page Source code
sls_logliks_div Man page Source code
sls_logliks_dummy Man page Source code
sls_logliks_experiment Man page Source code
sls_logliks_nodiv Man page Source code
sls_main Man page Source code
sls_main_dummy Man page Source code
sls_ml Man page Source code
sls_ml_dummy Man page Source code
sls_n_0s Man page Source code
sls_sim Man page Source code
ut Man page Source code
Giappo/sls documentation built on Feb. 1, 2021, 9:55 a.m.

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