API for Giappo/sls

Global functions
arrange_times_matrix Man page Source code
check_input_data_coherence Man page Source code
check_number_of_species Man page Source code
dataset_1 Man page
dataset_2 Man page
dataset_3 Man page
dataset_Bart Man page
dataset_Fork Man page
dataset_PB Man page
dataset_Rampal Man page
dataset_branching1 Man page
dataset_branching2 Man page
dataset_branching3 Man page
dataset_shifting1 Man page
dataset_shifting2 Man page
dataset_shifting3 Man page
default_params_doc Man page Source code
export_results_to_xls Man page Source code
export_results_to_xls_2 Man page Source code
get_std Man page Source code
get_std2 Man page Source code
is_on_travis Man page Source code
lik_Pi Man page Source code
lik_custom Man page Source code
lik_custom_single_lineage Man page Source code
lik_custom_single_lineage3 Man page Source code
lik_custom_split Man page Source code
lik_custom_split2 Man page Source code
lik_custom_split3 Man page Source code
lik_pt Man page Source code
lik_single_event Man page Source code
lik_ut Man page Source code
load_all_data Man page Source code
shuffle Man page Source code
sim_B_example Man page Source code
sim_R_example Man page Source code
sim_bd Man page Source code
sim_check_id_presence Man page Source code
sim_check_ok_condition Man page Source code
sim_custom Man page Source code
sim_custom2 Man page Source code
sim_custom3 Man page Source code
sim_custom_repeat Man page Source code
sim_event_branching Man page Source code
sim_event_branching2 Source code
sim_event_branching3 Source code
sim_event_shift Man page Source code
sim_evolve_lineages Man page Source code
sim_get_changing_lineage Man page Source code
sim_get_ids Man page Source code
sim_make_branching Man page Source code
sim_make_branching2 Man page Source code
sim_make_branching3 Man page Source code
sim_make_shifting Man page Source code
sim_produce_bad_lineages Man page Source code
sim_series Man page Source code
sim_tidy_up_lineages Man page Source code
split_times_matrix Man page Source code
split_times_matrix3 Man page Source code
test_likelihood_formula Man page Source code
test_likelihood_formula2 Man page Source code
times_matrix2t_coordinates Man page Source code
update_regimes Man page Source code
variable_name2string Man page Source code
Giappo/sls documentation built on June 8, 2018, 11:23 p.m.