Description Usage Arguments Value Examples
Calculates ML.
1 2 3 4 5 6 7 8 9 10 11 |
loglik_function |
the loglik function you want to use |
brts |
branching times provided as a list of vectors, one for the main clade, one for the subclade |
start_pars |
parameters to start from for the search of the likelihood maximum |
n_0 |
starting number of lineages |
cond |
type of conditioning:
|
optim_ids |
ids of the parameters you want to optimize. |
true_pars |
true parameter values when running the ml process. |
verbose |
set it to TRUE if you want to see the outputs on screen |
max_iterations |
maximum number of iterations for the optimizer |
best parameters
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.