sim_sample_deltas: Sample deltas for Doob-Gillespie

Description Usage Arguments Value Author(s)

View source: R/sls_sim_utils.R

Description

sls_sim module

Usage

1
sim_sample_deltas(data, clade, pars)

Arguments

data

contains all the information about the simulated process

clade

the id of the clade

pars

parameters of the likelihood functions:

  • pars[1] is lambda_m, i.e. speciation rate of the main clade;

  • pars[2] is mu_m, i.e. extinction rate of the main clade;

  • pars[3] is lambda_s, i.e. speciation rate of the sub clade;

  • pars[4] is mu_s, i.e. extinction rate of the sub clade;

Value

delta_n and delta_t

Author(s)

Giovanni Laudanno


Giappo/sls documentation built on Feb. 1, 2021, 9:55 a.m.