normalizePromoterReadCounts: Normalize promoter read counts using DESeq2

Description Usage Arguments Value

View source: R/junction-read-count.R

Description

Normalize promoter read counts using DESeq2

Usage

1
normalizePromoterReadCounts(promoterReadCounts)

Arguments

promoterReadCounts

A data.frame object. The number of junction reads per promoter (rows) for each sample (cols)

Value

A data.frame object. The normalized number of junction reads per promoter (rows) for each sample (cols) using DESeq2 counts function. Requires 'DESeq2' package to be installed


GoekeLab/proActiv documentation built on June 26, 2021, 6:39 a.m.