DOSE-package: DOSE: Disease Ontology Semantic and Enrichment analysis

In GuangchuangYu/DOSE: Disease Ontology Semantic and Enrichment analysis

DOSE: Disease Ontology Semantic and Enrichment analysis

Description

This package implements five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively for measuring semantic similarities among DO terms and gene products. Enrichment analyses including hypergeometric model and gene set enrichment analysis are also implemented for discovering disease associations of high-throughput biological data.

Author(s)

Maintainer: Guangchuang Yu [e-mail]

Other contributors:

• Li-Gen Wang [e-mail] [contributor]

• Vladislav Petyuk [e-mail] [contributor]

• Giovanni Dall'Olio [e-mail] [contributor]

• Erqiang Hu [e-mail] [contributor]

See Also

Useful links:

• https://yulab-smu.top/biomedical-knowledge-mining-book/

• Report bugs at https://github.com/GuangchuangYu/DOSE/issues

GuangchuangYu/DOSE documentation built on April 27, 2024, 4:03 p.m.