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saphy: sequential analysis of phylogenies

This package contains methods for the sequential (real-time, online) analysis of phylogenies and sequence data.

Schema v1.0

Installing the package

To install the devel version of the package, type:


Note that this requires the package devtools installed.

Note if using a mac, you will need lgfortran and lquadmath libraries installed before hand in order to compile rhydynR:

curl -O
sudo tar fvxz gfortran-4.8.2-darwin13.tar.bz2 -C /

Contributors (by alphabetic order):

Maintainer (temporary): Simon Frost ([email protected])

Hackout3/saphy documentation built on May 6, 2019, 10:52 p.m.