timeprune: Prune tree in time order
In Hackout3/saphy: Sequential Analysis of Phylogenies
Description
Usage
Arguments
Value
Author(s)
Description
timeprune prunes a tree by removing tips one at a time, in reverse time order.
If the time is omitted and the tree is rooted, then the root-to-tip distance is used as
a proxy of sampling time.
Usage
1
Arguments
tr
a tree, as a phylo object
tipdates
a vector of sampling times or dates
reverse
a boolean (default: FALSE) determining whether the list of trees should be returned
in reverse time
Value
A list with tipdates and trees.
Author(s)
Simon Frost (sdwfrost@gmail.com)
Hackout3/saphy documentation built on May 6, 2019, 10:52 p.m.
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Description Usage Arguments Value Author(s)
Description
timeprune prunes a tree by removing tips one at a time, in reverse time order.
If the time is omitted and the tree is rooted, then the root-to-tip distance is used as
a proxy of sampling time.
Usage
1 |
Arguments
tr |
a tree, as a |
tipdates |
a vector of sampling times or dates |
reverse |
a boolean (default: |
Value
A list with tipdates and trees.
Author(s)
Simon Frost (sdwfrost@gmail.com)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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