View source: R/getSummaryFile.R
getSummaryFile | R Documentation |
Retrieval function of the assembly_summary.txt file from NCBI.
getSummaryFile(db, kingdom, file = assemblies_info_path(db, kingdom))
db |
database name. E.g. |
kingdom |
kingdom for which assembly_summary.txt file shall be
retrieved. See also |
file |
path, local path to total summary file, default is in tmp folder. |
Hajk-Georg Drost
getKingdomAssemblySummary
,
getMetaGenomeSummary
## Not run:
test <- getSummaryFile("refseq","plant")
test
## End(Not run)
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