Files in HajkD/biomartr
Genomic Data Retrieval

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

NAMESPACE

NEWS.md R/N50.R R/Refseq_Genbank_ftp_generics.R R/Refseq_Genbank_post_processing.R R/biomart.R R/biomartr-package.R R/check_annotation_biomartr.R R/clean.retrieval.R R/clean_species_names_helper.R R/connected.to.internet.R R/custom_download.R R/download_database.R R/download_database_all.R R/ensembl_ftp_generics.R R/existingOrganisms.R R/existingOrganisms_ensembl.R R/exists.ftp.file.R R/get.ensembl.info.R R/getAssemblyStats.R R/getAttributes.R R/getBioSet.R R/getCDS.R R/getCollection.R R/getDatasets.R R/getENSEMBL.R R/getENSEMBLGENOMES.R R/getENSEMBLInfo.R R/getFilters.R R/getGENOMEREPORT.R R/getGFF.R R/getGO.R R/getGenome.R R/getGroups.R R/getKingdomAssemblySummary.R R/getKingdoms.R R/getMarts.R R/getMetaGenomeAnnotations.R R/getMetaGenomeSummary.R R/getMetaGenomes.R R/getProteome.R R/getRNA.R R/getReleases.R R/getRepeatMasker.R R/getSet.R R/getSubMarts.R R/getSummaryFile.R R/getUniProtInfo.R R/getUniProtSTATS.R R/getUniProtSeq.R R/is.ensembl.alive.R R/is.genome.available.R R/listDatabases.R R/listGenomes.R R/listGroups.R R/listKingdoms.R R/listMetaGenomes.R R/listNCBIDatabases.R R/messages.R R/meta.retrieval.R R/meta.retrieval.all.R R/organismAttributes.R R/organismBM.R R/organismFilters.R R/readAssemblyDoc.R R/read_assemblystats.R R/read_cds.R R/read_genome.R R/read_gff.R R/read_md5file.R R/read_proteome.R R/read_rm.R R/read_rna.R R/refseqOrganisms.R R/summary_cds.R R/summary_genome.R R/test_url_status.R R/tidy_name.R R/utils.R README.md

codemeta.json

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docs/reference/read_proteome.html

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inst/CITATION

inst/seqs/ortho_lyra_aa.fasta

inst/seqs/ortho_lyra_cds.fasta

inst/seqs/ortho_thal_aa.fasta

vignettes/BioMart_Examples.html

vignettes/Database_Retrieval.R vignettes/Database_Retrieval.Rmd

vignettes/Database_Retrieval.html

vignettes/Functional_Annotation.R vignettes/Functional_Annotation.Rmd

vignettes/Functional_Annotation.html

vignettes/MetaGenome_Retrieval.R vignettes/MetaGenome_Retrieval.Rmd

vignettes/MetaGenome_Retrieval.html

vignettes/Sequence_Retrieval.R vignettes/Sequence_Retrieval.Rmd

vignettes/Sequence_Retrieval.html

HajkD/biomartr documentation built on Dec. 9, 2023, 7:25 p.m.

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HajkD/biomartr
Genomic Data Retrieval

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Genomic Data Retrieval

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HajkD/biomartr Genomic Data Retrieval

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HajkD/biomartr
Genomic Data Retrieval

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Genomic Data Retrieval