makeParamMatrixG: generic function which assigns values for Rtype or stoichiom...

In HelenKettle/microPop: Modelling Microbial Populations

Description

generic function which assigns values for Rtype or stoichiom to an array of the same name array has form [group,resource,path] reads in data from MFG dataframes

Usage

makeParamMatrixG(microbeNames, parameterName, numPaths, resData,
  microbeMolarMass, resNames)

Arguments

microbeNames	Vector of strings which contains the names of the microbial groups in the system e.g. c('Bacteroides','Acetogens')
parameterName	Name of parameter (Rtype and stoichiom)
numPaths	Named vector. Number of paths for each microbial group
resData	sys info dataframe for resources
microbeMolarMass	Scalar. Molar mass of microbe e.g. 113g/mol
resNames	Vector of strings which contains the names of the resources in the system

Value

array of form: parameterName [gname,rname,pname]

HelenKettle/microPop documentation built on May 18, 2019, 9:15 p.m.