microbeSysInfo: microbeSysInfo

In HelenKettle/microPop: Modelling Microbial Populations

Description

Data frame describing the system information for the microbial state variables

Usage

microbeSysInfo

Format

A dataframe with the row names in the itemised list below and a column for units (optional) and for each microbial functional group (MFG) in the system to be simulated.

Details

Each MFG has a column. The first column can be used for describing the units of each variable. This is optional and just for clarity - it is not used within microPop (note, the units column must be labelled 'units'). The data frame must contain the following rows:

• startValue The value of each MFG at the start time of the simulation (e.g. units are g/l)

• inflowRate The value of the rate of inflow of each MFG (e.g. units are g/l/d)

• washOut The specific washout rate of each MFG (e.g. units are /d)

HelenKettle/microPop documentation built on May 18, 2019, 9:15 p.m.