cut_projarea_rst_mscn_b: Cut multiple projection areas of multiple species based on a...

In HemingNM/ENMwizard: Advanced Techniques for Ecological Niche Modeling Made Easy

Cut multiple projection areas of multiple species based on a single SpatialPolygon object (e.g. Ecoregion)

Description

This function will use a single SpatialPolygon to crop/mask multiple raster/brick objects to be used on model projections.

Usage

cut_projarea_rst_mscn_b(
  area.p,
  env.uncut.l,
  occ.polys,
  mask = FALSE,
  sp.mask.l = NULL,
  prj.nm = "",
  sp.nm = "mult.spp",
  numCores = 1
)

Arguments

area.p	SpatialPolygon to be used as reference to crop/mask environmental variables of all species
env.uncut.l	list of raster/brick of environmental variables to be cut
occ.polys	list of occ.poly SpatialPolygons. see ?set_projarea for details.
mask	Should mask raster? (i.e. only use area inside polygon. See ?raster::mask for details) or use all spatial extent of area.p
sp.mask.l	a list of objects of class: SpatialPolygons or SpatialPolygonsDataFrame, used as additional mask to be applied on the predictor variables (env.uncut) #' @seealso set_projarea, set_projarea_b, cut_projarea, cut_projarea_b, cut_projarea_mscn_b, cut_projarea_rst, cut_projarea_rst_mscn_b
prj.nm	climatic scenario name, usually "fut" or "past" is used to indicate a general timing of scenario
sp.nm	name (of species) to give to saved object
numCores	specify number of cores if aim run in parallel

Value

list of list with multiple environmental layers (raster/brick) cutted

See Also

set_projarea, set_projarea_b, cut_projarea, cut_projarea_b, cut_projarea_mscn_b, cut_projarea_rst, cut_projarea_rst_b

HemingNM/ENMwizard documentation built on Jan. 4, 2024, 3:24 p.m.