plot.SnpNmfFit: Generates a multi-panel plot summarizing the NMF SNP fit

In HenrikBengtsson/ACNE: Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization

Generates a multi-panel plot summarizing the NMF SNP fit

Description

Generates a multi-panel plot summarizing the NMF SNP fit.

Usage

## S3 method for class 'SnpNmfFit'
plot(x, lim=c(0, 2^16), cnLim=c(0, 4), epsLim=c(-1, 1) * 2^12, main=NULL, ...)

Arguments

lim, cnLim, epsLim	The plot ranges for the probe data, the CN estimates, and the probe-affinity estimates.
main	A character string to be the main title of the plot.
...	Not used.

Value

Return nothing.

See Also

See fitSnpNmfArray().

HenrikBengtsson/ACNE documentation built on Feb. 20, 2024, 8:20 p.m.