dropChangePoints.AbstractCBS: Drops zero or more change points

In HenrikBengtsson/PSCBS: Analysis of Parent-Specific DNA Copy Numbers

Drops zero or more change points

Description

Drops zero or more change points, which is done by dropping one change point at the time using *dropChangePoint() and recalculating the segment statistics at the end.

NOTE: This method only works if there is only one chromosome.

Usage

## S3 method for class 'AbstractCBS'
dropChangePoints(fit, idxs, update=TRUE, ...)

Arguments

idxs	An integer vector specifying the change points to be dropped.
update	If TRUE, segment statistics are updated.
...	Other arguments passed to *dropChangePoint() and *updateMeans().

Value

Returns an AbstractCBS of the same class with length(idxs) segments.

Author(s)

Henrik Bengtsson

See Also

For more information see AbstractCBS.

HenrikBengtsson/PSCBS documentation built on Feb. 20, 2024, 9:01 p.m.