getSmoothLocusData.CBS: Gets smoothed locus-level data
In HenrikBengtsson/PSCBS: Analysis of Parent-Specific DNA Copy Numbers
getSmoothLocusData.CBS R Documentation
Gets smoothed locus-level data
Description
Gets smoothed locus-level data.
Usage
## S3 method for class 'CBS'
getSmoothLocusData(fit, by, ...)
Arguments
fit
An CBS object.
by
A numeric scalar specifying the bin size.
...
Not used.
Value
Returns a data.frame where the
first three columns are 'chromosome', 'x' (position),
and 'count' (number of loci average over for the given bin),
and the remaining ones are the smoothed locus-level data.
Author(s)
Henrik Bengtsson
See Also
For more information see CBS.
HenrikBengtsson/PSCBS documentation built on Feb. 20, 2024, 9:01 p.m.
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| getSmoothLocusData.CBS | R Documentation |
Gets smoothed locus-level data
Description
Gets smoothed locus-level data.
Usage
## S3 method for class 'CBS'
getSmoothLocusData(fit, by, ...)
Arguments
fit |
An |
by |
A |
... |
Not used. |
Value
Returns a data.frame where the
first three columns are 'chromosome', 'x' (position),
and 'count' (number of loci average over for the given bin),
and the remaining ones are the smoothed locus-level data.
Author(s)
Henrik Bengtsson
See Also
For more information see CBS.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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