source("incl/start.R")
## NOTE:
## These tests consumes a large amount of RAM (> 20 GiB)
## /HB 2021-05-09
library(future)
plan(list(
chr_bin_rho = multisession, ## overlap_score_summary_grid()
mono_chr = sequential, ## +-- overlap_scores_partitions()
samples = sequential ## - " -
))
for (reference_rhos in c("50%", "same")) {
for (weights in c("uniform", "by_length")) {
pathnames <- overlap_score_summary_vs_fraction(
dataset = dataset,
chromosomes = chromosomes,
bin_sizes = bin_sizes,
rhos = rhos,
reference_rhos = reference_rhos,
window_size = 5L,
weights = weights,
domain_length = c(500e3, 1000e3),
nsamples = nsamples,
verbose = TRUE
)
print(pathnames)
}
}
source("incl/end.R")
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