Man pages for JGCRI/gcamland
GCAM Land Allocation Module

add_parameter_dataAdd model parameter values to a table of model results
AgProductionTechnology_calcProfitRateAgProductionTechnology_calcProfitRate
AgProductionTechnology_initCalcAgProductionTechnology_initCalc
AgProductionTechnology_setupAgProductionTechnology_setup
as.ScenarioInfoConvert an object to a 'ScenarioInfo' object
calc_loglikelihoodCompute the log-likelihoods for each data point
calc_postCompute the log-likelihood and log-posteriors for a set of...
calc_priorCompute the log-prior for a paremeter set
ChoiceFunctionChoiceFunction
EVCalculate the parameter expectation values for a collection...
ev_singleHelper function for EV
export_resultsExport scenario results as a csv file
extract_pointwise_loglikeExtract the pointwise log likelihood values from a...
extract_post_vectorExtract the posterior vector for the samples in a...
FAO_land_historyHistorical land use data
gcamlandgcamland: A stand-alone implementation of the GCAM land...
gen_ensemble_memberGenerate the ensemble members for a single set of parameters
get_AgProdChangeget_AgProdChange
get_hindcast_AgProdChangeget_hindcast_AgProdChange
get_hindcast_pricesget_hindcast_prices
get_historical_land_dataGet historical land use data
get_lpdfSelect a log-probability density function
getNestConstruct a table of land node nestings
get_per_to_yrget_per_to_yr
get_pricesget_prices
get_scenario_land_dataLoad land use results for a list of already-run scenarios
getScenNamegetScenName
getStartYeargetStartYear
get_timestepget_timestep
get_yr_to_perget_yr_to_per
grand_tableOrganize a list of ScenarioInfo objects into a grand table of...
HPDICalculate highest posterior density interval (HPDI) for a set...
is.ScenarioInfoTest whether an object is a 'ScenarioInfo' object
LaggedExpectation_calcExpectedPriceLaggedExpectation_calcExpectedPrice
LaggedExpectation_calcExpectedYieldLaggedExpectation_calcExpectedYield
LandAllocatorLandAllocator
LandAllocator_addChildLandAllocator_addChild
LandAllocator_addToNestLandAllocator_addToNest
LandAllocator_calcFinalLandAllocationLandAllocator_calcFinalLandAllocation
LandAllocator_calcLandAllocationLandAllocator_calcLandAllocation
LandAllocator_calcLandSharesLandAllocator_calcLandShares
LandAllocator_calculateNodeProfitRatesLandAllocator_calculateNodeProfitRates
LandAllocator_calculateShareWeightsLandAllocator_calculateShareWeights
LandAllocator_calibrateLandAllocatorLandAllocator_calibrateLandAllocator
LandAllocator_getLandSharesLandAllocator_getLandShares
LandAllocator_getOutputsLandAllocator_getOutputs
LandAllocator_initCalcLandAllocator_initCalc
LandAllocator_setInitSharesLandAllocator_setInitShares
LandAllocator_setUnmanagedLandProfitRateLandAllocator_setUnmanagedLandProfitRate
LandAllocator_setupLandAllocator_setup
LandLeafLandLeaf
LandLeaf_calcLandAllocationLandLeaf_calcLandAllocation
LandLeaf_calcLandSharesLandLeaf_calcLandShares
LandLeaf_calculateShareWeightsLandLeaf_calculateShareWeights
LandLeaf_getCalLandAllocationLandLeaf_getCalLandAllocation
LandLeaf_getOutputsLandLeaf_getOutputs
LandLeaf_initCalcLandLeaf_initCalc
LandLeaf_setInitSharesLandLeaf_setInitShares
LandNodeLandNode
LandNode_addChildLandNode_addChild
LandNode_addToNestLandNode_addToNest
LandNode_calcLandAllocationLandNode_calcLandAllocation
LandNode_calcLandSharesLandNode_calcLandShares
LandNode_calculateNodeProfitRatesLandNode_calculateNodeProfitRates
LandNode_calculateShareWeightLandNode_calculateShareWeight
LandNode_calculateShareWeightsLandNode_calculateShareWeights
LandNode_getCalLandAllocationLandNode_getCalLandAllocation
LandNode_getChildWithHighestShareLandNode_getChildWithHighestShare
LandNode_getLandSharesLandNode_getLandShares
LandNode_getObservedAverageProfitRateLandNode_getObservedAverageProfitRate
LandNode_getOutputsLandNode_getOutputs
LandNode_initCalcLandNode_initCalc
LandNode_setInitSharesLandNode_setInitShares
LandNode_setUnmanagedLandProfitRateLandNode_setUnmanagedLandProfitRate
LandNode_setupLandNode_setup
Leaf_setupLeaf_setup
LinearExpectation_calcExpectedPriceLinearExpectation_calcExpectedPrice
LinearExpectation_calcExpectedYieldLinearExpectation_calcExpectedYield
LN1_setupLN1_setup
log_sumCompute the log of the sum of values given as logs
lppdCompute the log pointwise predictive density for a single...
MAPCalculate MAP (maximum a posteriori) estimates for a...
outdir_setupSet up output directories
PerfectExpectation_calcExpectedPricePerfectExpectation_calcExpectedPrice
PerfectExpectation_calcExpectedYieldPerfectExpectation_calcExpectedYield
plotLandAllocationplotLandAllocation
plotNestplotNest
plotRegionalLandAllocationplotRegionalLandAllocation
pointwise_loglikeReturn pointwise log likelihood density for all samples in a...
PRICESPrice tables for each scenario type.
printAllOutputsprintAllOutputs
printDebugWrite out additional information for debugging
printLandSharesprintLandShares
printNestprintNest
printOutputprintLandAllocation
printPricesprintPrices
pwaicCompute the effective number of parameters 'pwaic' for a...
ReadData_AgProdReadData_AgProd
ReadData_LN0ReadData_LN0
ReadData_LN1_LeafChildrenReadData_LN1_LeafChildren
ReadData_LN1_NodeReadData_LN1_Node
ReadData_LN2_LandLeafReadData_LN2_LandLeaf
ReadData_LN2_NodeReadData_LN2_Node
ReadData_LN2_UnmanagedLandLeafReadData_LN2_UnmanagedLandLeaf
ReadData_LN3_LandLeafReadData_LN3_LandLeaf
ReadData_LN3_NodeReadData_LN3_Node
ReadData_LN3_UnmanagedLandLeafReadData_LN3_UnmanagedLandLeaf
RelativeCostLogit_calcImpliedCostRelativeCostLogit_calcImpliedCost
RelativeCostLogit_calcShareWeightRelativeCostLogit_calcShareWeight
RelativeCostLogit_calcUnnormalizedShareRelativeCostLogit_calcUnnormalizedShare
RelativeCostLogit_getMinCostThresholdRelativeCostLogit_getMinCostThreshold
REQD.SUBDIRSRequired subdirectories for output directory
run_bayesRun all the Bayesian analysis on a list of scenarios
run_ensembleRun an ensemble of offline land models
run_modelRun the GCAM land model
ScenarioInfoScenarioInfo constructor
SCENARIO.INFOSCENARIO.INFO
Sector_initCalcSector_initCalc
SectorUtils_normalizeSharesSectorUtils_normalizeShares
softmaxCompute the softmax function of a vector
Subsector_initCalcSubsector_initCalc
sumxSum values, minimizing roundoff error
UnmanagedLandLeafUnmanagedLandLeaf
UnmanagedLandLeaf_initCalcUnmanagedLandLeaf_initCalc
UnmanagedLandLeaf_setUnmanagedLandProfitRateUnmanagedLandLeaf_setUnmanagedLandProfitRate
waicCompute the WAIC for a list of scenarios
JGCRI/gcamland documentation built on July 14, 2018, 4:44 a.m.