Files in JGCRI/gcamland
GCAM Land Allocation Module

.Rbuildignore
.github/ISSUE_TEMPLATE/bug_report.md .github/ISSUE_TEMPLATE/feature_request.md
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/ag_production_technology.R R/bayesian.R R/constants.R R/data.R R/gcamland.R R/generate_price_data.R R/generate_scenario_info.R R/helpers.R R/lagged_expectation.R R/land_allocator.R R/land_leaf.R R/land_node.R R/linear_expectation.R R/main.R R/perfect_expectation.R R/plot_land.R R/process_hindcast_data.R R/read_data.R R/relative_cost_logit.R R/reporting.R R/sector.R R/sector_utils.R R/setup.R
R/sysdata.rda
R/unmanaged_land_leaf.R R/waic.R README.md
codecov.yml
data-raw/FAO_Land.csv
data-raw/faoland.R data-raw/stats-testdata.R
data/FAO_land_history.rda
gcamland.Rproj
inst/CITATION
inst/extdata/hindcast-data/fao_ha.csv
inst/extdata/hindcast-data/fao_prices.csv
inst/extdata/hindcast-data/fao_prod.csv
inst/extdata/hindcast-data/gdp_deflator.csv
inst/extdata/initialization-data/L201.AgProduction_For.csv
inst/extdata/initialization-data/L201.AgProduction_Past.csv
inst/extdata/initialization-data/L201.AgProduction_ag.csv
inst/extdata/initialization-data/L205.AgCost_For.csv
inst/extdata/initialization-data/L205.AgCost_ag.csv
inst/extdata/initialization-data/L205.AgCost_bio.csv
inst/extdata/initialization-data/L211.LN0_Land.csv
inst/extdata/initialization-data/L211.LN0_Logit.csv
inst/extdata/initialization-data/L211.LN1_UnmgdAllocation.csv
inst/extdata/initialization-data/L211.LN1_ValueLogit.csv
inst/extdata/initialization-data/L212.LN2_Logit.csv
inst/extdata/initialization-data/L212.LN2_MgdAllocation.csv
inst/extdata/initialization-data/L212.LN2_UnmgdAllocation.csv
inst/extdata/initialization-data/L213.LN3_DefaultShare.csv
inst/extdata/initialization-data/L213.LN3_Logit.csv
inst/extdata/initialization-data/L213.LN3_MgdAllocation_bio.csv
inst/extdata/initialization-data/L213.LN3_MgdAllocation_crop.csv
inst/extdata/initialization-data/L213.LN3_MgdAllocation_noncrop.csv
inst/extdata/initialization-data/L213.LN3_NewTech.csv
inst/extdata/initialization-data/L213.LN3_UnmgdAllocation.csv
inst/extdata/initialization-data/L214.LN1_ProtectAllocation.csv
inst/extdata/initialization-data/L214.LN2_UnmgdAllocation.csv
inst/extdata/initialization-data/L215.LN1_ProtectAllocation.csv
inst/extdata/initialization-data/L215.LN3_UnmgdAllocation.csv
inst/extdata/mappings/AGLU_ctry.csv
inst/extdata/mappings/FAO_ag_items_PRODSTAT.csv
inst/extdata/mappings/GCAM_region_names.csv
inst/extdata/mappings/iso_GCAM_regID.csv
inst/extdata/scenario-data/AgPrices_Reference.csv
inst/extdata/scenario-data/L205.AgProdChange_ref.csv
inst/scripts/jobrun.zsh
inst/scripts/mc-batch.R inst/scripts/recalc_pdf.R man/AgProductionTechnology_calcProfitRate.Rd man/AgProductionTechnology_initCalc.Rd man/AgProductionTechnology_setup.Rd man/ChoiceFunction.Rd man/EV.Rd man/FAO_land_history.Rd man/HPDI.Rd man/LN1_setup.Rd man/LaggedExpectation_calcExpectedPrice.Rd man/LaggedExpectation_calcExpectedYield.Rd man/LandAllocator.Rd man/LandAllocator_addChild.Rd man/LandAllocator_addToNest.Rd man/LandAllocator_calcFinalLandAllocation.Rd man/LandAllocator_calcLandAllocation.Rd man/LandAllocator_calcLandShares.Rd man/LandAllocator_calculateNodeProfitRates.Rd man/LandAllocator_calculateShareWeights.Rd man/LandAllocator_calibrateLandAllocator.Rd man/LandAllocator_getLandShares.Rd man/LandAllocator_getOutputs.Rd man/LandAllocator_initCalc.Rd man/LandAllocator_setInitShares.Rd man/LandAllocator_setUnmanagedLandProfitRate.Rd man/LandAllocator_setup.Rd man/LandLeaf.Rd man/LandLeaf_calcLandAllocation.Rd man/LandLeaf_calcLandShares.Rd man/LandLeaf_calculateShareWeights.Rd man/LandLeaf_getCalLandAllocation.Rd man/LandLeaf_getOutputs.Rd man/LandLeaf_initCalc.Rd man/LandLeaf_setInitShares.Rd man/LandNode.Rd man/LandNode_addChild.Rd man/LandNode_addToNest.Rd man/LandNode_calcLandAllocation.Rd man/LandNode_calcLandShares.Rd man/LandNode_calculateNodeProfitRates.Rd man/LandNode_calculateShareWeight.Rd man/LandNode_calculateShareWeights.Rd man/LandNode_getCalLandAllocation.Rd man/LandNode_getChildWithHighestShare.Rd man/LandNode_getLandShares.Rd man/LandNode_getObservedAverageProfitRate.Rd man/LandNode_getOutputs.Rd man/LandNode_initCalc.Rd man/LandNode_setInitShares.Rd man/LandNode_setUnmanagedLandProfitRate.Rd man/LandNode_setup.Rd man/Leaf_setup.Rd man/LinearExpectation_calcExpectedPrice.Rd man/LinearExpectation_calcExpectedYield.Rd man/MAP.Rd man/PRICES.Rd man/PerfectExpectation_calcExpectedPrice.Rd man/PerfectExpectation_calcExpectedYield.Rd man/REQD.SUBDIRS.Rd man/ReadData_AgProd.Rd man/ReadData_LN0.Rd man/ReadData_LN1_LeafChildren.Rd man/ReadData_LN1_Node.Rd man/ReadData_LN2_LandLeaf.Rd man/ReadData_LN2_Node.Rd man/ReadData_LN2_UnmanagedLandLeaf.Rd man/ReadData_LN3_LandLeaf.Rd man/ReadData_LN3_Node.Rd man/ReadData_LN3_UnmanagedLandLeaf.Rd man/RelativeCostLogit_calcImpliedCost.Rd man/RelativeCostLogit_calcShareWeight.Rd man/RelativeCostLogit_calcUnnormalizedShare.Rd man/RelativeCostLogit_getMinCostThreshold.Rd man/SCENARIO.INFO.Rd man/ScenarioInfo.Rd man/SectorUtils_normalizeShares.Rd man/Sector_initCalc.Rd man/Subsector_initCalc.Rd man/UnmanagedLandLeaf.Rd man/UnmanagedLandLeaf_initCalc.Rd man/UnmanagedLandLeaf_setUnmanagedLandProfitRate.Rd man/add_parameter_data.Rd man/as.ScenarioInfo.Rd man/calc_loglikelihood.Rd man/calc_post.Rd man/calc_prior.Rd man/ev_single.Rd man/export_results.Rd man/extract_pointwise_loglike.Rd man/extract_post_vector.Rd man/gcamland.Rd man/gen_ensemble_member.Rd man/getNest.Rd man/getScenName.Rd man/getStartYear.Rd man/get_AgProdChange.Rd man/get_hindcast_AgProdChange.Rd man/get_hindcast_prices.Rd man/get_historical_land_data.Rd man/get_lpdf.Rd man/get_per_to_yr.Rd man/get_prices.Rd man/get_scenario_land_data.Rd man/get_timestep.Rd man/get_yr_to_per.Rd man/grand_table.Rd man/is.ScenarioInfo.Rd man/log_sum.Rd man/lppd.Rd man/outdir_setup.Rd man/plotLandAllocation.Rd man/plotNest.Rd man/plotRegionalLandAllocation.Rd man/pointwise_loglike.Rd man/printAllOutputs.Rd man/printDebug.Rd man/printLandShares.Rd man/printNest.Rd man/printOutput.Rd man/printPrices.Rd man/pwaic.Rd man/run_bayes.Rd man/run_ensemble.Rd man/run_model.Rd man/softmax.Rd man/sumx.Rd man/waic.Rd
outputs/.gitignore
tests/testthat.R
tests/testthat/.gitignore
tests/testthat/comparison-data/HistLandAllocation.csv
tests/testthat/comparison-data/LandAllocation_Reference_Perfect.csv
tests/testthat/complex_filter_ref.csv
tests/testthat/data/obs-test.csv
tests/testthat/data/output_ensemble.rds
tests/testthat/data/scenario-info.rds
tests/testthat/data/xvals-test.csv
tests/testthat/test_bayesian.R tests/testthat/test_expectations.R tests/testthat/test_globals.R tests/testthat/test_helpers.R tests/testthat/test_logit.R tests/testthat/test_model_output.R tests/testthat/test_plot.R tests/testthat/test_reference.R tests/testthat/test_scenarios.R tests/testthat/test_setup.R tests/testthat/test_shares.R
JGCRI/gcamland documentation built on July 14, 2018, 4:44 a.m.