Files in JGCRI/rfasst
rfasst
.Rbuildignore
.github/.gitignore
.github/workflows/build.yml
.github/workflows/pkgdown.yaml
.github/workflows/test_coverage.yml
.gitignore
CONTRIBUTING.md
DESCRIPTION
DISCLAIMER
LICENSE
NAMESPACE
NEWS.md
R/ancillary_functions.R
R/constants.R
R/data.R
R/m1_emissions_rescale.R
R/m2_conc.R
R/m3_health.R
R/m4_agriculture.R
R/rfasst.R
README.md
_config.yml
_pkgdown.yml
data/CONV_1975_2010.rda
data/CONV_BIL.rda
data/CONV_MIL.rda
data/CONV_OC_POM.rda
data/CONV_OCawb_POM.rda
data/CONV_TG_T.rda
data/CROP_ANALYSIS.rda
data/GCAM_reg.rda
data/MTC_MTCO2.rda
data/Percen.rda
data/Regions.rda
data/TG_KG.rda
data/a.Mi_MAIZE.rda
data/a.Mi_RICE.rda
data/a.Mi_SOY.rda
data/a.Mi_WHEAT.rda
data/adj_rus.rda
data/all_years.rda
data/b.Mi_MAIZE.rda
data/b.Mi_RICE.rda
data/b.Mi_SOY.rda
data/b.Mi_WHEAT.rda
data/cf_o3.rda
data/ch4_htap_pert.rda
data/coef.AOT_MAIZE.rda
data/coef.AOT_RICE.rda
data/coef.AOT_SOY.rda
data/coef.AOT_WHEAT.rda
data/coef.Mi_MAIZE.rda
data/coef.Mi_RICE.rda
data/coef.Mi_SOY.rda
data/coef.Mi_WHEAT.rda
data/country_iso.rda
data/d.gcam.commod.o3.rda
data/d.ha.rda
data/d.iso.rda
data/d.weight.gcam.rda
data/dis.rda
data/fasstSubset.rda
data/fasst_reg.rda
data/gdp_eu_2005.rda
data/inc_elas_vsl.rda
data/map_pol.rda
data/my_pol.rda
data/perc_pop_rue.rda
data/perc_pop_rus.rda
data/raw.base_aot.rda
data/raw.base_conc.rda
data/raw.base_em.rda
data/raw.base_mi.rda
data/raw.daly.rda
data/raw.gdp.rda
data/raw.mort.rates.rda
data/raw.rr.param.bur2014.rda
data/raw.rr.param.bur2018.with.rda
data/raw.rr.param.bur2018.without.rda
data/raw.rr.param.gbd2016.rda
data/raw.rr.rda
data/raw.ssp.data.rda
data/raw.twn.pop.rda
data/raw.urb_incr.rda
data/raw.yll.o3.rda
data/raw.yll.pm25.rda
data/rr_resp_o3.rda
data/rr_resp_o3_GBD2016_high.rda
data/rr_resp_o3_GBD2016_low.rda
data/rr_resp_o3_GBD2016_med.rda
data/rr_resp_o3_Jerret2009_high.rda
data/rr_resp_o3_Jerret2009_low.rda
data/rr_resp_o3_Jerret2009_med.rda
data/src.bc.rda
data/src.m6m_ch4.rda
data/src.m6m_nmvoc.rda
data/src.m6m_nox.rda
data/src.m6m_so2.rda
data/src.maize_aot40_ch4.rda
data/src.maize_aot40_nmvoc.rda
data/src.maize_aot40_nox.rda
data/src.maize_aot40_so2.rda
data/src.maize_mi_ch4.rda
data/src.maize_mi_nmvoc.rda
data/src.maize_mi_nox.rda
data/src.maize_mi_so2.rda
data/src.nh4_nh3.rda
data/src.nh4_nox.rda
data/src.nh4_so2.rda
data/src.no3_nh3.rda
data/src.no3_nox.rda
data/src.no3_so2.rda
data/src.o3_ch4.rda
data/src.o3_nmvoc.rda
data/src.o3_nox.rda
data/src.o3_so2.rda
data/src.pom.rda
data/src.rice_aot40_ch4.rda
data/src.rice_aot40_nmvoc.rda
data/src.rice_aot40_nox.rda
data/src.rice_aot40_so2.rda
data/src.rice_mi_ch4.rda
data/src.rice_mi_nmvoc.rda
data/src.rice_mi_nox.rda
data/src.rice_mi_so2.rda
data/src.so4_nh3.rda
data/src.so4_nox.rda
data/src.so4_so2.rda
data/src.soy_aot40_ch4.rda
data/src.soy_aot40_nmvoc.rda
data/src.soy_aot40_nox.rda
data/src.soy_aot40_so2.rda
data/src.soy_mi_ch4.rda
data/src.soy_mi_nmvoc.rda
data/src.soy_mi_nox.rda
data/src.soy_mi_so2.rda
data/src.wheat_aot40_ch4.rda
data/src.wheat_aot40_nmvoc.rda
data/src.wheat_aot40_nox.rda
data/src.wheat_aot40_so2.rda
data/src.wheat_mi_ch4.rda
data/src.wheat_mi_nmvoc.rda
data/src.wheat_mi_nox.rda
data/src.wheat_mi_so2.rda
data/vsl_eu_2005.rda
data/vsl_eu_2005_lb.rda
data/vsl_eu_2005_ub.rda
data/vsly_eu_2005.rda
data/vsly_eu_2014.rda
inst/extdata/queries_rfasst.xml
inst/extdata/saveDataFiles.R
man/CONV_1975_2010.Rd
man/CONV_BIL.Rd
man/CONV_MIL.Rd
man/CONV_OC_POM.Rd
man/CONV_OCawb_POM.Rd
man/CONV_TG_T.Rd
man/CROP_ANALYSIS.Rd
man/GCAM_reg.Rd
man/MTC_MTCO2.Rd
man/Percen.Rd
man/Regions.Rd
man/TG_KG.Rd
man/a.Mi_MAIZE.Rd
man/a.Mi_RICE.Rd
man/a.Mi_SOY.Rd
man/a.Mi_WHEAT.Rd
man/adj_rus.Rd
man/all_years.Rd
man/b.Mi_MAIZE.Rd
man/b.Mi_RICE.Rd
man/b.Mi_SOY.Rd
man/b.Mi_WHEAT.Rd
man/calc_daly_o3.Rd
man/calc_daly_pm25.Rd
man/calc_daly_tot.Rd
man/calc_gdp_pc.Rd
man/calc_mort_rates.Rd
man/calc_pop.Rd
man/calc_price_gcam.Rd
man/calc_prod_gcam.Rd
man/calc_rev_gcam.Rd
man/cf_o3.Rd
man/ch4_htap_pert.Rd
man/coef.AOT_MAIZE.Rd
man/coef.AOT_RICE.Rd
man/coef.AOT_SOY.Rd
man/coef.AOT_WHEAT.Rd
man/coef.Mi_MAIZE.Rd
man/coef.Mi_RICE.Rd
man/coef.Mi_SOY.Rd
man/coef.Mi_WHEAT.Rd
man/country_iso.Rd
man/d.gcam.commod.o3.Rd
man/d.ha.Rd
man/d.iso.Rd
man/d.weight.gcam.Rd
man/dis.Rd
man/fasst_reg.Rd
man/gdp_eu_2005.Rd
man/inc_elas_vsl.Rd
man/interpLinear.Rd
man/m1_emissions_rescale.Rd
man/m2_get_conc_aot40.Rd
man/m2_get_conc_m6m.Rd
man/m2_get_conc_mi.Rd
man/m2_get_conc_o3.Rd
man/m2_get_conc_pm25.Rd
man/m3_get_daly_o3.Rd
man/m3_get_daly_pm25.Rd
man/m3_get_mort_o3.Rd
man/m3_get_mort_o3_ecoloss.Rd
man/m3_get_mort_pm25.Rd
man/m3_get_mort_pm25_ecoloss.Rd
man/m3_get_yll_o3.Rd
man/m3_get_yll_o3_ecoloss.Rd
man/m3_get_yll_pm25.Rd
man/m3_get_yll_pm25_ecoloss.Rd
man/m4_get_prod_loss.Rd
man/m4_get_rev_loss.Rd
man/m4_get_ryl_aot40.Rd
man/m4_get_ryl_mi.Rd
man/map_pol.Rd
man/my_pol.Rd
man/perc_pop_rue.Rd
man/perc_pop_rus.Rd
man/raw.base_aot.Rd
man/raw.base_conc.Rd
man/raw.base_em.Rd
man/raw.base_mi.Rd
man/raw.daly.Rd
man/raw.gdp.Rd
man/raw.mort.rates.Rd
man/raw.rr.Rd
man/raw.rr.param.bur2014.Rd
man/raw.rr.param.bur2018.with.Rd
man/raw.rr.param.bur2018.without.Rd
man/raw.rr.param.gbd2016.Rd
man/raw.ssp.data.Rd
man/raw.twn.pop.Rd
man/raw.urb_incr.Rd
man/raw.yll.o3.Rd
man/raw.yll.pm25.Rd
man/rfasst.Rd
man/rr_resp_o3_GBD2016_high.Rd
man/rr_resp_o3_GBD2016_low.Rd
man/rr_resp_o3_GBD2016_med.Rd
man/rr_resp_o3_Jerret2009_high.Rd
man/rr_resp_o3_Jerret2009_low.Rd
man/rr_resp_o3_Jerret2009_med.Rd
man/src.bc.Rd
man/src.m6m_ch4.Rd
man/src.m6m_nmvoc.Rd
man/src.m6m_nox.Rd
man/src.m6m_so2.Rd
man/src.maize_aot40_ch4.Rd
man/src.maize_aot40_nmvoc.Rd
man/src.maize_aot40_nox.Rd
man/src.maize_aot40_so2.Rd
man/src.maize_mi_ch4.Rd
man/src.maize_mi_nmvoc.Rd
man/src.maize_mi_nox.Rd
man/src.maize_mi_so2.Rd
man/src.nh4_nh3.Rd
man/src.nh4_nox.Rd
man/src.nh4_so2.Rd
man/src.no3_nh3.Rd
man/src.no3_nox.Rd
man/src.no3_so2.Rd
man/src.o3_ch4.Rd
man/src.o3_nmvoc.Rd
man/src.o3_nox.Rd
man/src.o3_so2.Rd
man/src.pom.Rd
man/src.rice_aot40_ch4.Rd
man/src.rice_aot40_nmvoc.Rd
man/src.rice_aot40_nox.Rd
man/src.rice_aot40_so2.Rd
man/src.rice_mi_ch4.Rd
man/src.rice_mi_nmvoc.Rd
man/src.rice_mi_nox.Rd
man/src.rice_mi_so2.Rd
man/src.so4_nh3.Rd
man/src.so4_nox.Rd
man/src.so4_so2.Rd
man/src.soy_aot40_ch4.Rd
man/src.soy_aot40_nmvoc.Rd
man/src.soy_aot40_nox.Rd
man/src.soy_aot40_so2.Rd
man/src.soy_mi_ch4.Rd
man/src.soy_mi_nmvoc.Rd
man/src.soy_mi_nox.Rd
man/src.soy_mi_so2.Rd
man/src.wheat_aot40_ch4.Rd
man/src.wheat_aot40_nmvoc.Rd
man/src.wheat_aot40_nox.Rd
man/src.wheat_aot40_so2.Rd
man/src.wheat_mi_ch4.Rd
man/src.wheat_mi_nmvoc.Rd
man/src.wheat_mi_nox.Rd
man/src.wheat_mi_so2.Rd
man/vsl_eu_2005.Rd
man/vsl_eu_2005_lb.Rd
man/vsl_eu_2005_ub.Rd
man/vsly_eu_2005.Rd
man/vsly_eu_2014.Rd
output/.gitignore.txt
output/m1/.gitignore.txt
output/m2/.gitignore.txt
output/m3/.gitignore.txt
output/m4/.gitignore.txt
output/maps/.gitignore.txt
output/maps/m1/.gitignore.txt
output/maps/m1/maps_em/.gitignore.txt
output/maps/m2/.gitignore.txt
output/maps/m2/maps_Mi/.gitignore.txt
output/maps/m2/maps_aot40/.gitignore.txt
output/maps/m2/maps_m6m/.gitignore.txt
output/maps/m2/maps_o3/.gitignore.txt
output/maps/m2/maps_pm2.5/.gitignore.txt
output/maps/m3/.gitignore.txt
output/maps/m3/maps_o3_daly/.gitignore.txt
output/maps/m3/maps_o3_mort/.gitignore.txt
output/maps/m3/maps_o3_mort_ecoloss/.gitignore.txt
output/maps/m3/maps_o3_yll/.gitignore.txt
output/maps/m3/maps_o3_yll_ecoloss/.gitignore.txt
output/maps/m3/maps_pm25_daly/.gitignore.txt
output/maps/m3/maps_pm25_mort/.gitignore.txt
output/maps/m3/maps_pm25_mort_ecoloss/.gitignore.txt
output/maps/m3/maps_pm25_yll/.gitignore.txt
output/maps/m3/maps_pm25_yll_ecoloss/.gitignore.txt
output/maps/m4/.gitignore.txt
output/maps/m4/gcam_agr_price/.gitignore.txt
output/maps/m4/gcam_agr_prod/.gitignore.txt
output/maps/m4/gcam_agr_rev/.gitignore.txt
output/maps/m4/maps_prodLoss/.gitignore.txt
output/maps/m4/maps_revLoss/.gitignore.txt
output/maps/m4/maps_ryl_aot40/.gitignore.txt
output/maps/m4/maps_ryl_mi/.gitignore.txt
paper/figure1.png
paper/figure_conc.png
paper/figure_rfasst.png
paper/paper.bib
paper/paper.md
rfasst.Rproj
tests/testthat.R
tests/testthat/inst/extdata/queries_rfasst.xml
tests/testthat/output/.gitignore.txt
tests/testthat/output/m1/.gitignore.txt
tests/testthat/output/m2/.gitignore.txt
tests/testthat/output/m3/.gitignore.txt
tests/testthat/output/m4/.gitignore.txt
tests/testthat/test-rfasst_00downloadDb.R
tests/testthat/test-rfasst_ancillary.R
tests/testthat/test-rfasst_calc.R
tests/testthat/test-rfasst_writeCSV.R
tests/testthat/testOutputs/.gitignore.txt
vignettes/.gitignore
vignettes/Module1_emissions.Rmd
vignettes/Module2_concentration.Rmd
vignettes/Module3_health.Rmd
vignettes/Module4_agriculture.Rmd
vignettes/vignetteFigs/.gitignore
vignettes/vignetteFigs/PM2.5_concentration_2050.png
vignettes/vignetteFigs/PM2.5_mort_2050.png
vignettes/vignetteFigs/Prod_Loss_2050.png
vignettes/vignetteFigs/emissions_2050.png
