API for JRC-COMBINE/FORESEE
A Tool for the Systematic Comparison of Translational Drug Response Modeling Pipelines
| Global functions | |
|---|---|
| BlackBoxFilter | Man page Source code |
| BlackBoxFilter.character | Source code |
| BlackBoxFilter.elasticnet | Source code |
| BlackBoxFilter.function | Source code |
| BlackBoxFilter.lasso | Source code |
| BlackBoxFilter.linear | Source code |
| BlackBoxFilter.rf | Source code |
| BlackBoxFilter.rf_ranger | Source code |
| BlackBoxFilter.ridge | Source code |
| BlackBoxFilter.svm | Source code |
| BlackBoxFilter.tandem | Source code |
| CellResponseProcessor | Man page Source code |
| CellResponseProcessor.binarization_cutoff | Source code |
| CellResponseProcessor.binarization_kmeans | Source code |
| CellResponseProcessor.character | Source code |
| CellResponseProcessor.function | Source code |
| CellResponseProcessor.logarithm | Source code |
| CellResponseProcessor.none | Source code |
| CellResponseProcessor.powertransform | Source code |
| CellResponseTypeAvailabilityCheck | Man page Source code |
| CellorPatient | Man page Source code |
| DuplicationHandler | Man page Source code |
| DuplicationHandler.character | Source code |
| DuplicationHandler.default | Source code |
| DuplicationHandler.first | Source code |
| DuplicationHandler.function | Source code |
| DuplicationHandler.mean | Source code |
| DuplicationHandler.none | Source code |
| FeatureCombiner | Man page Source code |
| FeaturePreprocessor | Man page Source code |
| FeaturePreprocessor.character | Source code |
| FeaturePreprocessor.function | Source code |
| FeaturePreprocessor.none | Source code |
| FeaturePreprocessor.pca | Source code |
| FeaturePreprocessor.physio | Source code |
| FeaturePreprocessor.zscore_genewise | Source code |
| FeaturePreprocessor.zscore_samplewise | Source code |
| FeatureSelector | Man page Source code |
| FeatureSelector.all | Source code |
| FeatureSelector.character | Source code |
| FeatureSelector.function | Source code |
| FeatureSelector.landmarkgenes | Source code |
| FeatureSelector.ontology | Source code |
| FeatureSelector.pathway | Source code |
| FeatureSelector.pvalue | Source code |
| FeatureSelector.variance | Source code |
| ForeseeTest | Man page Source code |
| ForeseeTrain | Man page Source code |
| Foreseer | Man page Source code |
| GetCellResponseData | Man page Source code |
| Homogenizer | Man page Source code |
| Homogenizer.ComBat | Source code |
| Homogenizer.RUV | Source code |
| Homogenizer.RUV4 | Source code |
| Homogenizer.YuGene | Source code |
| Homogenizer.character | Source code |
| Homogenizer.default | Source code |
| Homogenizer.function | Source code |
| Homogenizer.limma | Source code |
| Homogenizer.none | Source code |
| Homogenizer.quantile | Source code |
| SampleSelector | Man page Source code |
| Validator | Man page Source code |
| Validator.character | Source code |
| Validator.default | Source code |
| Validator.fpvalue | Source code |
| Validator.function | Source code |
| Validator.mse | Source code |
| Validator.pearson | Source code |
| Validator.prauc | Source code |
| Validator.rocauc | Source code |
| Validator.rocpvalue | Source code |
| Validator.rsquared | Source code |
| Validator.rsquared_adjusted | Source code |
| Validator.spearman | Source code |
| listCellLines | Man page Source code |
| listDrugs | Man page Source code |
| listInputOptions | Man page Source code |
| requireForesee | Man page Source code |
