makeSNPClusters: make SNP-based clusters for each threshold set in the model
In JamesStimson/transcluster: Transmission clustering using SNPs and sample dates
Description
Usage
Arguments
Value
Examples
Description
make SNP-based clusters for each threshold set in the model
Usage
1
makeSNPClusters(thisModel, nameBase = "SNPcluster", writeFile = TRUE)
Arguments
thisModel
cluster analysis model created using createModel()
nameBase
(optional) basis of name to be used for output cluster files
writeFile
(optional) cluster files will be written if TRUE
Value
list of clusters
Examples
1
mySNPClusters <- makeSNPClusters(myModel, 'test')
JamesStimson/transcluster documentation built on May 24, 2020, 10:39 p.m.
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Description Usage Arguments Value Examples
Description
make SNP-based clusters for each threshold set in the model
Usage
1 | makeSNPClusters(thisModel, nameBase = "SNPcluster", writeFile = TRUE)
|
Arguments
thisModel |
cluster analysis model created using createModel() |
nameBase |
(optional) basis of name to be used for output cluster files |
writeFile |
(optional) cluster files will be written if TRUE |
Value
list of clusters
Examples
1 | mySNPClusters <- makeSNPClusters(myModel, 'test')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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