hapiPhase: Phase draft haplotypes by majority voting

In Jialab-UCR/Hapi: Inference of Chromosome-length Haplotypes using Genomic Data of Single Gamete Cells

Description

Phase draft haplotypes by majority voting

Usage

hapiPhase(gmt)

Arguments

gmt	a dataframe of imputed genotype data of gamete cells

Value

a dataframe of inferred draft haplotypes

Author(s)

Ruidong Li

Examples

ref <- rep(0,500)
alt <- rep(1,500)
imputedFrame <- data.frame(gmt1=ref, gmt2=alt, gmt3=ref, 
gmt4=ref, gmt5=c(alt[1:250], ref[251:500]),
stringsAsFactors = FALSE)
draftHap <- hapiPhase(gmt=imputedFrame)

Jialab-UCR/Hapi documentation built on May 30, 2019, 11:41 a.m.