riboORFs: Load Predicted translons

riboORFsR Documentation

Load Predicted translons

Description

Load Predicted translons

Usage

riboORFs(df, type = "table", folder = riboORFsFolder(df))

Arguments

df

ORFik experiment

type

default "table", alternatives: c("table", "ranges_candidates", "ranges_predictions", "predictions")

folder

base folder to check for computed results, default: riboORFsFolder(df)

Value

a data.table, GRangesList or list of logical vector depending on input

Examples

df <- ORFik.template.experiment()
df <- df[df$libtype == "RFP",][c(1,2),]
# riboORFs(df) # Works when you have run prediction

JokingHero/ORFik documentation built on Dec. 21, 2024, 12:01 a.m.