startDefinition: Returns start codon definitions

View source: R/find_ORFs.R

startDefinitionR Documentation

Returns start codon definitions

Description

According to: <http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/ index.cgi?chapter=tgencodes#SG1> ncbi genetic code number for translation. This version is a cleaned up version, unknown indices removed.

Usage

startDefinition(transl_table)

Arguments

transl_table

numeric. NCBI genetic code number for translation.

Value

A string of START sites separatd with "|".

See Also

Other findORFs: findMapORFs(), findORFs(), findORFsFasta(), findUORFs(), stopDefinition()

Examples

startDefinition
startDefinition(1)


JokingHero/ORFik documentation built on Dec. 21, 2024, 12:01 a.m.