unlistGrl: Safe unlist
In JokingHero/ORFik: Open Reading Frames in Genomics

unlistGrl

R Documentation

Safe unlist

Description

Same as [AnnotationDbi::unlist2()], keeps names correctly. Two differences is that if grl have no names, it will not make integer names, but keep them as null. Also if the GRangesList has names , and also the GRanges groups, then the GRanges group names will be kept.

Usage

unlistGrl(grl)

Arguments

grl

a GRangesList

Value

a GRanges object

Examples

ORF <- GRanges(seqnames = "1",
               ranges = IRanges(start = c(1, 10, 20),
                                end = c(5, 15, 25)),
               strand = "+")
grl <- GRangesList(tx1_1 = ORF)
unlistGrl(grl)

JokingHero/ORFik documentation built on Dec. 21, 2024, 12:01 a.m.