tidyqpcr: tidyqpcr: A package for tidy qpcr data analysis.

In JorikBot/tidyqpcr: Function for tidy ddCt qPCR analysis

Description

The tidyqpcr package provides functions for finding and removing outliers, averaging technical replicates, calculating dCq values and calculating ddCq values.

Package functions

• qpcr_clean is used to remove outliers based on a given maximum deviation from the median Cq value.

• qpcr_outlier_context can be used to find all the technical replicate groups that contain at least one outlier.

• qpcr_avg_techrep averages technical replicates.

• qpcr_dcq calculates the dCq values.

• qpcr_ddcq calculates the ddCq values.

• qpcr_summary is used to quickly calculate the mean and standard deviation for a given column.

JorikBot/tidyqpcr documentation built on Jan. 28, 2021, 11:44 a.m.